Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs403981 chr21:46020066 A/G 5.37E-5 521 16.37 36.4 40.58 KM Plot
KIRC rs404341 chr21:46020242 A/G 3.06E-5 517 16.37 34.87 42.27 KM Plot
KIRC rs4112785 chr1:152533115 G/C 6.48E-5 524 35.6 44.3 37.77 KM Plot
KIRC rs41284519 chr6:31388522 C/T 9.52E-6 517 38.95 45.93 1.88 KM Plot
KIRC rs4130522 chr3:48352313 G/A 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs4141097 chr7:46580508 T/C 5.18E-5 518 47.58 33.8 28.7 KM Plot
KIRC rs4240885 chr1:152529850 G/C 5.85E-5 525 35.6 44.05 37.77 KM Plot
KIRC rs4274583 chr2:67538600 A/G 1.9E-7 525 40.57 37.7 2.03 KM Plot
KIRC rs4318565 chr3:96081510 C/T 2.37E-10 527 3.37 41.27 38.93 KM Plot
KIRC rs4330675 chr8:125488907 C/T 2.25E-5 527 38.9 45.68 4.7 KM Plot
KIRC rs4336952 chr10:117674244 G/T 3.4E-5 527 42.33 22.47 22.17 KM Plot
KIRC rs4364452 chr6:165359668 T/C 2.07E-5 527 17.28 41.53 39.7 KM Plot
KIRC rs4371540 chr3:48353543 G/A 3.09E-5 523 39.53 41.27 19.13 KM Plot
KIRC rs4374405 chr2:2620063 C/T 4.06E-5 521 38.98 44.57 8.35 KM Plot
KIRC rs4392440 chr3:48343920 C/T 3.14E-5 521 39.62 40.93 19.13 KM Plot